Bll6525 hypothetical protein
Hypothetical proteins are created by gene prediction software during genome analysis. When the bioinformatic tool used for the gene identification finds a large open reading frame without a characterised homologue in the protein database , it returns "hypothetical protein" as an annotation remark. See more In biochemistry, a hypothetical protein is a protein whose existence has been predicted, but for which there is a lack of experimental evidence that it is expressed in vivo. Sequencing of several genomes has resulted in … See more • Domain of unknown function See more • ExPASy See more WebA significant number of proteins in the genome of the Bacillus paralicheniformis strain Bac84 are annotated as functionally uncharacterized hypothetical proteins. Investigating these...
Bll6525 hypothetical protein
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WebMar 12, 2024 · Getting hypothetical protein is not something exclusively related to the annotation tool. This is primarily due to the databases/training datasets which do not simply have the protein... WebAug 3, 2012 · There were no domains in the other 3 proteins. The presence of these domains in the hypothetical proteins reveals that the proteins might be involved in performing the same function. The domains of the hypothetical proteins and their super-family descriptions were given in Table 2 & Table 3 (see supplementary material).
WebAug 26, 2024 · Hypothetical proteins are an uncharacterized protein that is not known for its function which could provide a deeper understanding of the metabolic pathway of the bacterial proteome. This paper ... WebATCC hypothetical protein bl00275 Hypothetical Protein Bl00275, supplied by ATCC, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. …
WebConserved Domain Database (CDD) CDD is a protein annotation resource that consists of a collection of well-annotated multiple sequence alignment models for ancient domains and full-length proteins. These are available as position-specific score matrices for fast identification of conserved domains in protein sequences via RPS-BLAST.CDD content … WebOct 6, 2024 · The hypothetical protein revealed tricopeptide repeat domain and rubredoxin metal-binding domain which regulates lipopolysaccharide metabolic process in the outer cell membrane which contributes to virulence property of the protein.
WebJan 1, 2004 · The proliferation of whole-genome expression and protein–protein interaction studies often provides evidence that a particular ‘conserved hypothetical’ protein is overexpressed under certain conditions (nutritional or oxidative stress, ultraviolet irradiation, and so on) (65, 78 – 81). Although this rarely furnishes direct indications ...
WebPrimary structure. The simplest level of protein structure, primary structure, is simply the sequence of amino acids in a polypeptide chain. For example, the hormone insulin has two polypeptide chains, A and B, shown in … chromatof tileWebOct 13, 2024 · Functional annotation of hypothetical proteins. Functional annotation was applied to the HPs to reveal their functions ().Firstly, several publicly available tools and databases (Pfam, InterPro, CATH, SUPERFAMILY, SMART, SCANPROSITE, and CDD-BLAST) are listed in the S2 Table were used. These bioinformatics tools and databases … chromatogram at each wavelengthWebMar 11, 2024 · Exploring the molecular mechanisms behind bacterial adaptation to extreme temperatures has potential biotechnological applications. In the present study, Pseudomonas sp. Lz4W, a Gram-negative psychrophilic bacterium adapted to survive in Antarctica, was selected to decipher the molecular mechanism underlying the cold … chromatographedWebobserved for the hypothetical protein PANDA 003700 partial. The Pfam result found a protein family match to the Ribosomal protein L10 family for the hypothetical protein. This is a . signifcant match according to the e value of 4.7e–1 After the hypothetical protein had been entered into Uniprot, an entry ID was found (D2H270). ghislaine maxwell animeWebThe Virulent Hypothetical Proteins: The Potential Drug Target Involved in Bacterial Pathogenesis Authors Muhammad Naveed 1 , Syeda Izma Makhdoom 1 , Ghulam Abbas 2 3 , Mohammadreza Safdari 4 , Amin Farhadi 5 , Solomon Habtemariam 6 , Muhammad Aqib Shabbir 1 , Khizra Jabeen 1 , Muhammad Farrukh Asif 1 , Sana Tehreem 7 Affiliations chromatofoorWebJun 9, 2024 · Abstract. Campylobacter jejuni (C. jejuni) is considered to be one of the most frequent causes of bacterial gastroenteritis globally, especially in young children. The genome of C. jejuni contains many proteins with unknown functions termed as hypothetical proteins (HPs). These proteins might have essential biological role to … ghislaine maxwell annie faWebApr 13, 1999 · Hypothetical proteins (i.e., those of unknown function) are prime candidates for functional and structural studies. Proteins in the double boxes in A, B, and C have 11, 6, and 10 ones, respectively, in their phylogenetic profiles, of a possible 16 for the 17 genomes presently sequenced. OPEN IN VIEWEROPEN IN VIEWER chromatographer